SimParam_setCorE {AlphaSimR} | R Documentation |
Defines a correlation structure for default
error variances. You must call SimParam_setVarE
first to define the default error variances.
corE |
a correlation matrix for the error variances |
SP$setCorE(corE)
#Create founder haplotypes founderPop = quickHaplo(nInd=10, nChr=1, segSites=10) #Set simulation parameters SP = SimParam$new(founderPop) SP$addTraitA(10, mean=c(0,0), var=c(1,1), corA=diag(2)) SP$setVarE(varE=c(1,1)) E = 0.5*diag(2)+0.5 #Positively correlated error SP$setCorE(E)