calcGCA {AlphaSimR} | R Documentation |
Calculate general combining ability of test crosses. Intended for output from hybridCross using the "testcross" option, but will work for any population.
calcGCA(pop, use = "pheno")
pop |
an object of |
use |
tabulate either genetic values "gv", estimated breeding values "ebv", or phenotypes "pheno" |
#Create founder haplotypes founderPop = quickHaplo(nInd=10, nChr=1, segSites=10, inbred=TRUE) #Set simulation parameters SP = SimParam$new(founderPop) SP$addTraitA(10) #Create population pop = newPop(founderPop, simParam=SP) #Make crosses for full diallele pop2 = hybridCross(pop, pop, simParam=SP) GCA = calcGCA(pop2, use="gv")