'Opal' Data Repository Client and 'DataSHIELD' Utils


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Documentation for package ‘opalr’ version 1.2.0

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dsadmin.get_method Get a DataSHIELD method
dsadmin.get_methods Get DataSHIELD methods
dsadmin.get_options Get the DataSHIELD options
dsadmin.installed_package Check DataSHIELD package
dsadmin.install_package Install a DataSHIELD package
dsadmin.package_description Get DataSHIELD package description
dsadmin.package_descriptions Get DataSHIELD package descriptions
dsadmin.remove_package Remove DataSHIELD package
dsadmin.rm_method Remove DataSHIELD method
dsadmin.rm_methods Remove DataSHIELD methods.
dsadmin.rm_option Remove a DataSHIELD option
dsadmin.rm_package_methods Remove DataSHIELD package methods
dsadmin.set_method Set DataSHIELD method
dsadmin.set_option Set DataSHIELD option
dsadmin.set_package_methods Set DataSHIELD package methods
oadmin.installed_devtools Check devtools package
oadmin.installed_package Check package is installed
oadmin.installed_packages List installed packages
oadmin.install_devtools Install devtools package
oadmin.install_github Install a package form GitHub
oadmin.install_package Install package
oadmin.package_description Get package description
oadmin.remove_package Remove package
opal.annotate Apply the annotations to a Opal table
opal.annotations Get the annotations of a Opal table
opal.assign Data or expression assignment
opal.assign.data Data assignment
opal.assign.script R script assignment
opal.assign.table Data assignment to a data.frame
opal.assign.table.tibble Data assignment to a tibble
opal.as_md_table Array to Markdown
opal.attribute_values Get a vector of values
opal.command Get an asynchronous command
opal.commands List the asynchronous commands
opal.commands_rm Remove all asynchronous commands
opal.command_result Get result of an asynchronous command
opal.command_rm Remove an asynchronous command
opal.datasource Get a datasource
opal.datasources Get datasources
opal.delete Generic REST resource deletion.
opal.execute Execute a R script
opal.file Get file content
opal.file_cp Copy a file
opal.file_download Download a file
opal.file_ls List content of a folder
opal.file_mkdir Make a folder
opal.file_mv Move and/or rename a file
opal.file_read Read a file
opal.file_rm Remove a file
opal.file_upload Upload a file
opal.file_write Write a file
opal.get Generic REST resource getter.
opal.load_package Load package
opal.login Opal login
opal.logout Logout from Opal(s)
opal.post Generic REST resource creation.
opal.project Get a project
opal.projects Get projects
opal.put Generic REST resource update.
opal.report Opal report
opal.rm Remove a R symbol (deprecated)
opal.symbols List R symbols
opal.symbol_import Import a tibble
opal.symbol_rm Remove a R symbol
opal.symbol_save Save a tibble
opal.table Get a table of a datasource
opal.tables Get tables of a datasource
opal.task Get a task
opal.tasks Get the tasks
opal.task_cancel Cancel a task
opal.task_wait Wait for a task to complete.
opal.taxonomies Get taxonomies
opal.taxonomy Get a taxonomy
opal.terms Get the terms of a vocabulary
opal.unload_package Unload package
opal.valueset Get the values of an entity
opal.variable Get a variable of a table
opal.variables Get variables of a table
opal.version_compare Compare
opal.vocabularies Get the vocabularies of a taxonomy
opal.vocabulary Get a taxonomy vocabulary
opal.workspaces Get the R workspaces from a opal.
opal.workspace_rm Remove a R workspace from a opal.
opal.workspace_save Save the current session in a opal R workspace.