traits_to_mfg_df {algaeClassify} | R Documentation |
Assign morphofunctional groups to a dataframe of functional traits and higher taxonomy
traits_to_mfg_df(dframe, arg.names = c("flagella", "size", "colonial", "filament", "centric", "gelatinous", "aerotopes", "class", "order"))
dframe |
An R dataframe containing functional trait information and higher taxonomy |
arg.names |
Character string of column names corresponding to arguments for traits_to_mfg() |
A character vector containing morpho-functional group (MFG) designations
#create a two-row example dataframe of functional traits func.dframe=data.frame(flag=1,size=c("large","small"),col=0,fil=0,cent=NA,gel=0, aer=0,cl="Euglenophyceae",or="Euglenales",stringsAsFactors=FALSE) #check the dataframe print(func.dframe) #run the function to produce a two-element character vector traits_to_mfg_df(func.dframe,c("flag","size","col","fil","cent","gel","aer","cl","or"))